EOS101811

Name:	CLONIDINE HYDROCHLORIDE
EOS:	EOS101811
CAS:	4205-90-7 [clonidine] 4205-91-8 4205-90-7
Synonyms:	CLONIDINE HYDROCHLORIDE CLONIDINE
Tags:	approved drug
Compound Library:	Bioactive Compound Library ECBL Pilot Compounds

Basic Properties:

Formula:	C9H10Cl3N3
Molecular Weight:	266.56
Rotatable Bond Donors:	1
clogP:	2.79
Topological Polar Surface Area:	36.42
Lipinski's RO5:	MW: 266.56 HBA: 3 HBD: 2 RB: 1 LogP: 2.79
Rule of Three:	MW: 266.56 HBA: 3 HBD: 2 RB: 1 LogP: 2.79

Additional Data:

Other Descriptors

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Feature	Value
FP3 Fingerprint:	0.22
NHs/OHs:	2
Nitrogens and Oxygens:	3
Aliphatic Carbocycles:	0
Aliphatic Heterocycles:	1
Aliphatic Rings:	1
Aromatic Carbocycles:	1
Aromatic Heterocycles:	0
Aromatic Rings:	1
Heteroatoms:	6
Radical Electrons:	0
Saturated Carbocycles:	0
Saturated Heterocycles:	0
Saturated Rings:	0
Valence Electrons:	82
Rings:	2
Aliphatic Carboxylic Acids:	0
Aliphatic Hydroxyl Groups:	0
Aliphatic Hydroxyl Groups Excluding Tert-OH:	0
Nitrogen Functional Groups Attached to Aromatics:	0
Aromatic Carboxylic Acide:	0
Aromatic Nitrogens:	0
Aromatic Amines:	0
Aromatic Hydroxyl Groups:	0
Carboxylic Acids (COO):	0
Carboxylic Acids (COO2):	0
Carbonyl Oxygens:	0
Carbonyl Oxygens, excluding COOH:	0
Thiocarbonyls:	0
C(OH)CCN-Ctert-alkyls/C(OH)CCNcyclics:	0
Imines:	1
Tertiary Amines:	1
Secondary Amines:	2
Primary Amines:	0
Hydroxylamine Groups:	0
XCCNR Groups:	0
Tert-alicyclic Amines (no heteroatoms, not quinine-like bridged N):	0
H-pyrrole nitrogens:	0
Thiol groups:	0
Aldehydes:	0
Alkyl Carbamates (subject to hydrolysis):	0
Alkyl Halides:	0
Allylic Oxidation Sites excluding Steroid Dienone:	0
Amides:	0
Amidine Groups:	0
Anilines:	1
Aryl Methyl Sites for Hydroxylation:	0
Azide Groups:	0
Azo Groups:	0
Barbiturate Groups:	0
Benzene Rings:	1
Benzodiazepines with no additional Fused Rings:	0
Bicyclic:	0
Diazo Groups:	0
Dihydropyridines:	0
Epoxide Rings:	0
Esters:	0
Ether Oxygens (including phenoxy):	0
Furan Rings:	0
Guanidine Groups:	1
Halogens:	3
Hydrazine Groups:	0
Hydrazone Groups:	0
Imidazole Rings:	0
Imide Groups:	0
Isocyanates:	0
Isothiocyanates:	0
Ketones:	0
Ketones excluding diaryl, a,b-unsat. dienones, heteroatom on Calpha:	0
Beta Lactams:	0
Cyclic Esters (Lactones):	0
Methoxy Groups -OCH3:	0
Morpholine Rings:	0
Nitriles:	0
Nitro Groups:	0
Nitro Benzene Ring Substituents:	0
Non-ortho Nitro Benzene Ring Substituents:	0
Nitroso Groups, excluding NO2:	0
Oxazole Rings:	0
Oxime Groups:	0
Para-hydroxylation Sites:	1
Phenols:	0
Phenolic OH excluding Ortho Intramolecular Hbond substituents:	0
Phosphoric Acid Groups:	0
Phosphoric Ester Groups:	0
Piperdine Rings:	0
Piperzine Rings:	0
Primary Amides:	0
Primary Sulfonamides:	0
Pyridine Rings:	0
Guarternary Nitrogens:	0
Thioethers:	0
Sulfonamides:	0
Sulfone Groups:	0
Terminal Acetylenes:	0
Tetrazole Rings:	0
Thiazole Rings:	0
Thiocyanates:	0
Thiophene Rings:	0
Unbranched Alkanes of at least 4 members (excludes halogenated alkanes):	0
Urea Groups:	0
BCUT2D - Gasteiger Charge Eigenvalue High:	2.09
BCUT2D - Gasteiger Charge Eigenvalue Low:	-2.09
BCUT2D - Crippen Lowgp Eigenvalue High:	2.29
BCUT2D - Crippen Lowgp Eigenvalue Low:	-2.26
BCUT2D - Crippen MR Eigenvalue High:	6.39
BCUT2D - Crippen MR Eigenvalue Low:	0.96
BCUT2D - Mass Eigenvalue High:	35.50
BCUT2D - Mass Eigenvalue Low:	10.29
Balaban’s J:	0.00
Bertz CT:	358.62
Chi 0:	9.97
Chi 0n:	7.76
Chi 0v:	10.09
Chi 1:	6.77
Chi 1n:	4.27
Chi 1v:	5.02
Chi 2n:	2.88
Chi 2v:	3.69
Chi 3v:	1.88
Chi 3v:	2.51
Chi 4n:	1.22
Chi 4v:	1.71
Morgan Fingerprint Density (1):	1.27
Morgan Fingerprint Density (2):	1.93
Morgan Fingerprint Density (3):	2.47
CSP3 Fraction:	0.22
Hall Kier Alpha:	-0.64
Heavy Atoms:	15.00
Ipc descriptor:	2573.31
Kappa 1:	12.43
Kappa 2:	5.45
Kappa 3:	2.91
Labute ASA:	104.28
Max ABS Estate Index:	5.98
Max ABS Partial Charge:	0.35
Max Estate Index:	5.98
Max Partial Charge:	0.20
Minimal ABS Estate Index:	0.00
Minimal ABS Partial Charge:	0.20
Minimal State Index:	0.00
Minimal Partial Charge:	-0.35
Molar Refractivity:	67.64
Quantitative Estimation of Drug-likeness (QED):	0.82

External Databases

Search:

DB
PubChem TPS (56452400)
PubChem (91824207)
eMolecules (493859)
ChEBI (3758)
ACToR (4205-91-8)
BindingDB (50020341)
ChEMBL (CHEMBL1705)
Selleck (Clonidine-hydrochloride(Catapres))
CompTox (DTXSID8044670)
Mcule (MCULE-6555265624)
MolPort (MolPort-003-928-972)
NIH NCC (SAM001247073)
SureChEMBL (SCHEMBL40751)
FDA SRS (W76I6XXF06)

Structure formats:

Smiles

InChI

SDF

EOS101811
     RDKit          3D

15 15  0  0  0  0  0  0  0  0999 V2000
    0.0000    0.0000    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -0.7070   -0.9886   -2.7415 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -1.3996   -0.2695   -1.3329 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5913    0.4366   -1.4999 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2071    1.0360   -0.4073 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6357    0.9213    0.8548 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4438    0.2158    1.0246 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8309    0.0904    2.6342 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -0.7986   -0.3847   -0.0694 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4130   -1.0994    0.0896 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.6029   -0.4095    0.1892 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7813    0.8840    0.0884 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.2403    1.0672    0.2731 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8624   -0.3101    0.4862 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7141   -1.1897    0.4109 N   0  0  0  0  0  0  0  0  0  0  0  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  1  0
  7  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
  9  3  1  0
 15 11  1  0
M  END

$$$$

Similar ECBD compounds (0 entries):

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	ECBD ID	Similarity	Structure	SDF
No data available in table

Similar ZINC compounds (0 entries):

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	ZINC ID	Similarity	Structure	SDF
No data available in table

Assays:

Name	Assay stage	Target	Activity
Single dose inhibition of SARS-CoV-2 cytopathic effect in VeroE6	primary assay	Organism Severe acute respiratory syndrome-related coronavirus	inactive
Single dose inhibition of SARS-CoV-2 3CL-Pro	primary assay	Replicase polyprotein 1ab	inactive

Sections:

EOS101811

Basic Properties:

Additional Data:

Other Descriptors

External Databases

Structure formats:

Smiles

InChI

SDF

Similar ECBD compounds (0 entries):

Similar ZINC compounds (0 entries):

Assays: