EOS101066

Name: METHOTREXATE
EOS: EOS101066 
CAS: CAS: 59-05-2
59-05-2
51865-79-3
102613-64-9
Synonyms: METHOTREXATE
Tags: approved drug
Compound Library: Bioactive Compound Library
ECBL Pilot Compounds
Molecule image

Basic Properties:

Formula: C20H22N8O5
Molecular Weight: 454.45
Rotatable Bond Donors: 9
clogP: 0.27
Topological Polar Surface Area: 210.54
Lipinski's RO5:  MW: 454.45  HBA: 13  HBD: 7  RB: 9  LogP: 0.27
Rule of Three:  MW: 454.45  HBA: 13  HBD: 7  RB: 9  LogP: 0.27

Additional Data:

Other Descriptors

FP3 Fingerprint: 0.25
NHs/OHs: 7
Nitrogens and Oxygens: 13
Aliphatic Carbocycles: 0
Aliphatic Heterocycles: 0
Aliphatic Rings: 0
Aromatic Carbocycles: 1
Aromatic Heterocycles: 2
Aromatic Rings: 3
Heteroatoms: 13
Radical Electrons: 0
Saturated Carbocycles: 0
Saturated Heterocycles: 0
Saturated Rings: 0
Valence Electrons: 172
Rings: 3
Aliphatic Carboxylic Acids: 2
Aliphatic Hydroxyl Groups: 0
Aliphatic Hydroxyl Groups Excluding Tert-OH: 0
Nitrogen Functional Groups Attached to Aromatics: 2
Aromatic Carboxylic Acide: 0
Aromatic Nitrogens: 4
Aromatic Amines: 0
Aromatic Hydroxyl Groups: 0
Carboxylic Acids (COO): 2
Carboxylic Acids (COO2): 2
Carbonyl Oxygens: 3
Carbonyl Oxygens, excluding COOH: 1
Thiocarbonyls: 0
C(OH)CCN-Ctert-alkyls/C(OH)CCNcyclics: 0
Imines: 0
Tertiary Amines: 5
Secondary Amines: 1
Primary Amines: 2
Hydroxylamine Groups: 0
XCCNR Groups: 0
Tert-alicyclic Amines (no heteroatoms, not quinine-like bridged N): 0
H-pyrrole nitrogens: 0
Thiol groups: 0
Aldehydes: 0
Alkyl Carbamates (subject to hydrolysis): 0
Alkyl Halides: 0
Allylic Oxidation Sites excluding Steroid Dienone: 0
Amides: 1
Amidine Groups: 0
Anilines: 3
Aryl Methyl Sites for Hydroxylation: 0
Azide Groups: 0
Azo Groups: 0
Barbiturate Groups: 0
Benzene Rings: 1
Benzodiazepines with no additional Fused Rings: 0
Bicyclic: 1
Diazo Groups: 0
Dihydropyridines: 0
Epoxide Rings: 0
Esters: 0
Ether Oxygens (including phenoxy): 0
Furan Rings: 0
Guanidine Groups: 0
Halogens: 0
Hydrazine Groups: 0
Hydrazone Groups: 0
Imidazole Rings: 0
Imide Groups: 0
Isocyanates: 0
Isothiocyanates: 0
Ketones: 0
Ketones excluding diaryl, a,b-unsat. dienones, heteroatom on Calpha: 0
Beta Lactams: 0
Cyclic Esters (Lactones): 0
Methoxy Groups -OCH3: 0
Morpholine Rings: 0
Nitriles: 0
Nitro Groups: 0
Nitro Benzene Ring Substituents: 0
Non-ortho Nitro Benzene Ring Substituents: 0
Nitroso Groups, excluding NO2: 0
Oxazole Rings: 0
Oxime Groups: 0
Para-hydroxylation Sites: 0
Phenols: 0
Phenolic OH excluding Ortho Intramolecular Hbond substituents: 0
Phosphoric Acid Groups: 0
Phosphoric Ester Groups: 0
Piperdine Rings: 0
Piperzine Rings: 0
Primary Amides: 0
Primary Sulfonamides: 0
Pyridine Rings: 0
Guarternary Nitrogens: 0
Thioethers: 0
Sulfonamides: 0
Sulfone Groups: 0
Terminal Acetylenes: 0
Tetrazole Rings: 0
Thiazole Rings: 0
Thiocyanates: 0
Thiophene Rings: 0
Unbranched Alkanes of at least 4 members (excludes halogenated alkanes): 0
Urea Groups: 0
BCUT2D - Gasteiger Charge Eigenvalue High: 2.21
BCUT2D - Gasteiger Charge Eigenvalue Low: -2.19
BCUT2D - Crippen Lowgp Eigenvalue High: 2.19
BCUT2D - Crippen Lowgp Eigenvalue Low: -2.41
BCUT2D - Crippen MR Eigenvalue High: 5.97
BCUT2D - Crippen MR Eigenvalue Low: -0.14
BCUT2D - Mass Eigenvalue High: 16.37
BCUT2D - Mass Eigenvalue Low: 10.10
Balaban’s J: 1.67
Bertz CT: 1201.03
Chi 0: 24.12
Chi 0n: 17.60
Chi 0v: 17.60
Chi 1: 15.63
Chi 1n: 9.75
Chi 1v: 9.75
Chi 2n: 7.20
Chi 2v: 7.20
Chi 3v: 4.72
Chi 3v: 4.72
Chi 4n: 3.03
Chi 4v: 3.03
Morgan Fingerprint Density (1): 1.09
Morgan Fingerprint Density (2): 1.79
Morgan Fingerprint Density (3): 2.42
CSP3 Fraction: 0.25
Hall Kier Alpha: -4.55
Heavy Atoms: 33.00
Ipc descriptor: 15580632.00
Kappa 1: 23.12
Kappa 2: 9.72
Kappa 3: 5.78
Labute ASA: 187.03
Max ABS Estate Index: 12.37
Max ABS Partial Charge: 0.48
Max Estate Index: 12.37
Max Partial Charge: 0.33
Minimal ABS Estate Index: 0.01
Minimal ABS Partial Charge: 0.33
Minimal State Index: -1.30
Minimal Partial Charge: -0.48
Molar Refractivity: 118.26
Quantitative Estimation of Drug-likeness (QED): 0.29

Structure formats:

Smiles


InChI


SDF


Similar ECBD compounds (2 entries):

ECBD ID Similarity Structure
EOS101674 0.75 Zinc molecule image
EOS102130 0.77 Zinc molecule image

Similar ZINC compounds (82 entries):

ZINC ID Similarity Structure
ZINC404265 0.78 Zinc molecule image
ZINC1653968 0.74 Zinc molecule image
ZINC71404938 0.82 Zinc molecule image
ZINC1618705 0.76 Zinc molecule image
ZINC71404939 0.82 Zinc molecule image
ZINC1618703 0.76 Zinc molecule image
ZINC1618704 0.76 Zinc molecule image
ZINC1618702 0.76 Zinc molecule image
ZINC8628655 0.72 Zinc molecule image
ZINC1728420 0.75 Zinc molecule image
ZINC2015690 0.75 Zinc molecule image
ZINC1728060 0.76 Zinc molecule image
ZINC1652270 0.75 Zinc molecule image
ZINC8651759 0.88 Zinc molecule image
ZINC1702426 0.72 Zinc molecule image
ZINC1728156 0.72 Zinc molecule image
ZINC8628657 0.75 Zinc molecule image
ZINC1590742 0.88 Zinc molecule image
ZINC3814831 0.76 Zinc molecule image
ZINC8619351 0.75 Zinc molecule image
ZINC1639813 0.73 Zinc molecule image
ZINC8619397 0.79 Zinc molecule image
ZINC8635216 0.72 Zinc molecule image
ZINC8628714 0.73 Zinc molecule image
ZINC1643916 0.79 Zinc molecule image
ZINC1643915 0.75 Zinc molecule image
ZINC1710602 0.75 Zinc molecule image
ZINC8627700 0.75 Zinc molecule image
ZINC1587572 0.77 Zinc molecule image
ZINC2036915 0.77 Zinc molecule image
ZINC28711171 0.79 Zinc molecule image
ZINC8627931 0.75 Zinc molecule image
ZINC17040024 0.72 Zinc molecule image
ZINC1748978 0.72 Zinc molecule image
ZINC28711172 0.79 Zinc molecule image
ZINC1716542 0.75 Zinc molecule image
ZINC1529323 1.0 Zinc molecule image
ZINC6920406 1.0 Zinc molecule image
ZINC8628726 0.79 Zinc molecule image
ZINC13284373 0.86 Zinc molecule image
ZINC8627722 0.74 Zinc molecule image
ZINC22062147 0.83 Zinc molecule image
ZINC200238277 0.89 Zinc molecule image
ZINC8214609 0.87 Zinc molecule image
ZINC8627939 0.86 Zinc molecule image
ZINC8627721 0.74 Zinc molecule image
ZINC26477688 0.91 Zinc molecule image
ZINC1560410190 0.82 Zinc molecule image
ZINC1722686 0.75 Zinc molecule image
ZINC3814826 0.79 Zinc molecule image
ZINC1734471 0.79 Zinc molecule image
ZINC1698176 0.79 Zinc molecule image
ZINC8628635 0.75 Zinc molecule image
ZINC16976849 0.77 Zinc molecule image
ZINC5120777 0.77 Zinc molecule image
ZINC8628656 0.77 Zinc molecule image
ZINC5086502 0.77 Zinc molecule image
ZINC11616925 0.75 Zinc molecule image
ZINC1536109 0.75 Zinc molecule image
ZINC11616927 0.75 Zinc molecule image
ZINC11616926 0.75 Zinc molecule image
ZINC8628650 0.83 Zinc molecule image
ZINC1727586 0.83 Zinc molecule image
ZINC8628634 0.79 Zinc molecule image
ZINC1722685 0.79 Zinc molecule image
ZINC77271350 0.83 Zinc molecule image
ZINC198047334 0.7 Zinc molecule image
ZINC198047329 0.78 Zinc molecule image
ZINC263607551 0.78 Zinc molecule image
ZINC253638769 0.7 Zinc molecule image
ZINC253638773 0.7 Zinc molecule image
ZINC84394901 0.78 Zinc molecule image
ZINC253638771 0.7 Zinc molecule image
ZINC253660204 0.78 Zinc molecule image
ZINC584577528 0.84 Zinc molecule image
ZINC17421410 0.82 Zinc molecule image
ZINC17000503 0.83 Zinc molecule image
ZINC1678412 0.83 Zinc molecule image
ZINC8655698 0.77 Zinc molecule image
ZINC4772545 0.87 Zinc molecule image
ZINC4772546 0.87 Zinc molecule image
ZINC1720422 0.75 Zinc molecule image

Assays: