EOS100532

Name:	citarinostat
EOS:	EOS100532
CAS:	1316215-12-9
Synonyms:	citarinostat
Tags:
Compound Library:	Bioactive Compound Library ECBL Pilot Compounds

Basic Properties:

Formula:	C24H26ClN5O3
Molecular Weight:	467.96
Rotatable Bond Donors:	11
clogP:	4.79
Topological Polar Surface Area:	107.45
Lipinski's RO5:	MW: 467.96 HBA: 8 HBD: 3 RB: 11 LogP: 4.79
Rule of Three:	MW: 467.96 HBA: 8 HBD: 3 RB: 11 LogP: 4.79

Additional Data:

Other Descriptors

Search:

Feature	Value
FP3 Fingerprint:	0.25
NHs/OHs:	3
Nitrogens and Oxygens:	8
Aliphatic Carbocycles:	0
Aliphatic Heterocycles:	0
Aliphatic Rings:	0
Aromatic Carbocycles:	2
Aromatic Heterocycles:	1
Aromatic Rings:	3
Heteroatoms:	9
Radical Electrons:	0
Saturated Carbocycles:	0
Saturated Heterocycles:	0
Saturated Rings:	0
Valence Electrons:	172
Rings:	3
Aliphatic Carboxylic Acids:	0
Aliphatic Hydroxyl Groups:	0
Aliphatic Hydroxyl Groups Excluding Tert-OH:	0
Nitrogen Functional Groups Attached to Aromatics:	0
Aromatic Carboxylic Acide:	0
Aromatic Nitrogens:	2
Aromatic Amines:	0
Aromatic Hydroxyl Groups:	0
Carboxylic Acids (COO):	0
Carboxylic Acids (COO2):	0
Carbonyl Oxygens:	2
Carbonyl Oxygens, excluding COOH:	2
Thiocarbonyls:	0
C(OH)CCN-Ctert-alkyls/C(OH)CCNcyclics:	0
Imines:	0
Tertiary Amines:	3
Secondary Amines:	2
Primary Amines:	0
Hydroxylamine Groups:	1
XCCNR Groups:	0
Tert-alicyclic Amines (no heteroatoms, not quinine-like bridged N):	0
H-pyrrole nitrogens:	0
Thiol groups:	0
Aldehydes:	0
Alkyl Carbamates (subject to hydrolysis):	0
Alkyl Halides:	0
Allylic Oxidation Sites excluding Steroid Dienone:	0
Amides:	2
Amidine Groups:	0
Anilines:	3
Aryl Methyl Sites for Hydroxylation:	0
Azide Groups:	0
Azo Groups:	0
Barbiturate Groups:	0
Benzene Rings:	2
Benzodiazepines with no additional Fused Rings:	0
Bicyclic:	0
Diazo Groups:	0
Dihydropyridines:	0
Epoxide Rings:	0
Esters:	0
Ether Oxygens (including phenoxy):	0
Furan Rings:	0
Guanidine Groups:	0
Halogens:	1
Hydrazine Groups:	0
Hydrazone Groups:	0
Imidazole Rings:	0
Imide Groups:	0
Isocyanates:	0
Isothiocyanates:	0
Ketones:	0
Ketones excluding diaryl, a,b-unsat. dienones, heteroatom on Calpha:	0
Beta Lactams:	0
Cyclic Esters (Lactones):	0
Methoxy Groups -OCH3:	0
Morpholine Rings:	0
Nitriles:	0
Nitro Groups:	0
Nitro Benzene Ring Substituents:	0
Non-ortho Nitro Benzene Ring Substituents:	0
Nitroso Groups, excluding NO2:	0
Oxazole Rings:	0
Oxime Groups:	0
Para-hydroxylation Sites:	2
Phenols:	0
Phenolic OH excluding Ortho Intramolecular Hbond substituents:	0
Phosphoric Acid Groups:	0
Phosphoric Ester Groups:	0
Piperdine Rings:	0
Piperzine Rings:	0
Primary Amides:	0
Primary Sulfonamides:	0
Pyridine Rings:	0
Guarternary Nitrogens:	0
Thioethers:	0
Sulfonamides:	0
Sulfone Groups:	0
Terminal Acetylenes:	0
Tetrazole Rings:	0
Thiazole Rings:	0
Thiocyanates:	0
Thiophene Rings:	0
Unbranched Alkanes of at least 4 members (excludes halogenated alkanes):	4
Urea Groups:	0
BCUT2D - Gasteiger Charge Eigenvalue High:	2.18
BCUT2D - Gasteiger Charge Eigenvalue Low:	-2.23
BCUT2D - Crippen Lowgp Eigenvalue High:	2.36
BCUT2D - Crippen Lowgp Eigenvalue Low:	-2.25
BCUT2D - Crippen MR Eigenvalue High:	6.33
BCUT2D - Crippen MR Eigenvalue Low:	-0.13
BCUT2D - Mass Eigenvalue High:	35.50
BCUT2D - Mass Eigenvalue Low:	10.13
Balaban’s J:	1.60
Bertz CT:	1047.48
Chi 0:	23.47
Chi 0n:	18.08
Chi 0v:	18.83
Chi 1:	16.10
Chi 1n:	10.73
Chi 1v:	11.11
Chi 2n:	7.35
Chi 2v:	7.76
Chi 3v:	4.95
Chi 3v:	5.27
Chi 4n:	3.25
Chi 4v:	3.47
Morgan Fingerprint Density (1):	0.91
Morgan Fingerprint Density (2):	1.58
Morgan Fingerprint Density (3):	2.27
CSP3 Fraction:	0.25
Hall Kier Alpha:	-3.49
Heavy Atoms:	33.00
Ipc descriptor:	28771012.00
Kappa 1:	24.16
Kappa 2:	12.52
Kappa 3:	7.00
Labute ASA:	197.14
Max ABS Estate Index:	12.43
Max ABS Partial Charge:	0.35
Max Estate Index:	12.43
Max Partial Charge:	0.25
Minimal ABS Estate Index:	0.25
Minimal ABS Partial Charge:	0.25
Minimal State Index:	-0.38
Minimal Partial Charge:	-0.35
Molar Refractivity:	127.07
Quantitative Estimation of Drug-likeness (QED):	0.21

External Databases

Search:

DB
BindingDB (110036)
PubChem TPS (125005362)
FDA SRS (441P620G3P)
PubChem (53340426)
GtoPdb (9426)
ChemicalBook (CB22723105)
ChEMBL (CHEMBL3693786)
DrugBank (DB15449)
MolPort (MolPort-035-690-892)
SureChEMBL (SCHEMBL2225863)
ZINC (ZINC000098023187)

Structure formats:

Smiles

InChI

SDF

EOS100532
     RDKit          3D

33 35  0  0  0  0  0  0  0  0999 V2000
   10.2104    1.7545    0.1139 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.2611    0.6657   -0.4495 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0480   -0.1216   -0.8593 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7898    0.7047   -0.7153 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5748   -0.1906   -0.7777 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3476    0.6681   -1.0005 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1138   -0.1973   -1.0961 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0681    0.5429   -1.8962 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7388    0.1993   -1.4682 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.1859    0.7944   -0.3554 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7634    1.6038    0.3615 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1930    0.4087   -0.0696 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8813   -0.5371   -0.7730 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1639   -0.8752   -0.5254 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8098   -0.2317    0.4664 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1936   -0.5181    0.7394 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8556   -1.7050    0.2671 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1528   -2.8010   -0.2480 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8079   -3.9441   -0.7020 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1957   -4.0157   -0.6486 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9227   -2.9465   -0.1405 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2553   -1.8100    0.3122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9252    0.4232    1.5456 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3728    0.0248    2.8168 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0600    0.9085    3.6461 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3132    2.2076    3.2176 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8919    2.6183    1.9567 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2032    1.7363    1.1228 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7964    2.3121   -0.4543 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   -2.1888    0.7095    1.2118 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9030    1.0061    0.9297 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4003   -0.0310   -0.7860 N   0  0  0  0  0  0  0  0  0  0  0  0
   12.5839    0.6364   -0.4116 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 16 23  1  0
 23 24  2  0
 24 25  1  0
 25 26  2  0
 26 27  1  0
 27 28  2  0
 28 29  1  0
 15 30  1  0
 30 31  2  0
  2 32  1  0
 32 33  1  0
 31 12  1  0
 22 17  1  0
 28 23  1  0
M  END

$$$$

Similar ECBD compounds (1 entries):

Search:

	ECBD ID	Similarity	Structure	SDF
	EOS100691	0.84		EOS100691 RDKit 3D 32 34 0 0 0 0 0 0 0 0999 V2000 7.0674 -0.0656 -0.0569 O 0 0 0 0 0 0 0 0 0 0 0 0 7.9331 0.3348 0.7152 C 0 0 0 0 0 0 0 0 0 0 0 0 7.8550 0.1764 2.2107 C 0 0 0 0 0 0 0 0 0 0 0 0 6.7536 -0.7764 2.6133 C 0 0 0 0 0 0 0 0 0 0 0 0 5.4301 -0.0498 2.6749 C 0 0 0 0 0 0 0 0 0 0 0 0 4.2747 -1.0156 2.5472 C 0 0 0 0 0 0 0 0 0 0 0 0 4.2274 -1.6864 1.1911 C 0 0 0 0 0 0 0 0 0 0 0 0 3.9373 -0.7042 0.0765 C 0 0 0 0 0 0 0 0 0 0 0 0 2.5285 -0.4121 -0.0224 N 0 0 0 0 0 0 0 0 0 0 0 0 1.6383 -1.3389 -0.5132 C 0 0 0 0 0 0 0 0 0 0 0 0 1.9374 -2.4613 -0.9029 O 0 0 0 0 0 0 0 0 0 0 0 0 0.2471 -0.8952 -0.5465 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.1681 0.3355 -0.1272 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.4528 0.7451 -0.1543 N 0 0 0 0 0 0 0 0 0 0 0 0 -2.3858 -0.1112 -0.6237 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.7672 0.2997 -0.6642 N 0 0 0 0 0 0 0 0 0 0 0 0 -4.8106 -0.6961 -0.6574 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.0384 -0.4676 -1.2956 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.0512 -1.4254 -1.2934 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.8534 -2.6404 -0.6472 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6462 -2.8946 -0.0061 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.6397 -1.9303 -0.0139 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.0957 1.7033 -0.7129 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.2436 2.6334 -1.3255 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.5585 3.9904 -1.3734 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.7421 4.4469 -0.8046 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6065 3.5476 -0.1905 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.2824 2.1925 -0.1476 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.0477 -1.3451 -1.0547 N 0 0 0 0 0 0 0 0 0 0 0 0 -0.7480 -1.7075 -1.0078 C 0 0 0 0 0 0 0 0 0 0 0 0 9.0873 1.0105 0.3784 N 0 0 0 0 0 0 0 0 0 0 0 0 9.2205 1.2075 -1.0106 O 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 2 3 1 0 3 4 1 0 4 5 1 0 5 6 1 0 6 7 1 0 7 8 1 0 8 9 1 0 9 10 1 0 10 11 2 0 10 12 1 0 12 13 2 0 13 14 1 0 14 15 2 0 15 16 1 0 16 17 1 0 17 18 2 0 18 19 1 0 19 20 2 0 20 21 1 0 21 22 2 0 16 23 1 0 23 24 2 0 24 25 1 0 25 26 2 0 26 27 1 0 27 28 2 0 15 29 1 0 29 30 2 0 2 31 1 0 31 32 1 0 30 12 1 0 22 17 1 0 28 23 1 0 M END $$$$

Similar ZINC compounds (2 entries):

Search:

	ZINC ID	Similarity	Structure	SDF
	ZINC98023187	1.0		ZINC98023187 RDKit 3D 33 35 0 0 0 0 0 0 0 0999 V2000 6.3086 -2.0493 1.7310 O 0 0 0 0 0 0 0 0 0 0 0 0 7.4815 -1.6921 1.6412 C 0 0 0 0 0 0 0 0 0 0 0 0 7.9449 -0.3813 2.2111 C 0 0 0 0 0 0 0 0 0 0 0 0 8.2217 0.6243 1.1121 C 0 0 0 0 0 0 0 0 0 0 0 0 6.9693 1.0133 0.3581 C 0 0 0 0 0 0 0 0 0 0 0 0 5.9418 1.6397 1.2736 C 0 0 0 0 0 0 0 0 0 0 0 0 4.5631 1.4950 0.6786 C 0 0 0 0 0 0 0 0 0 0 0 0 3.9552 0.1682 1.0814 C 0 0 0 0 0 0 0 0 0 0 0 0 2.5216 0.1998 0.9432 N 0 0 0 0 0 0 0 0 0 0 0 0 1.9234 0.1386 -0.2941 C 0 0 0 0 0 0 0 0 0 0 0 0 2.5245 0.0544 -1.3578 O 0 0 0 0 0 0 0 0 0 0 0 0 0.4641 0.1943 -0.2753 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.2745 0.3214 0.8658 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.6218 0.3871 0.8874 N 0 0 0 0 0 0 0 0 0 0 0 0 -2.2815 0.3164 -0.2862 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.7203 0.3585 -0.3141 N 0 0 0 0 0 0 0 0 0 0 0 0 -4.5113 0.8272 0.7937 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.9574 1.5422 1.8614 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.7377 1.9991 2.9242 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.1052 1.7481 2.9387 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.6878 1.0443 1.8924 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.8962 0.5942 0.8355 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.3783 -0.0377 -1.5302 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.0854 0.9293 -2.2662 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.7236 0.6010 -3.4609 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.6647 -0.7022 -3.9411 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.9802 -1.6784 -3.2218 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.3396 -1.3535 -2.0248 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.5873 -2.6488 -1.1632 Cl 0 0 0 0 0 0 0 0 0 0 0 0 -1.6173 0.1895 -1.4567 N 0 0 0 0 0 0 0 0 0 0 0 0 -0.2683 0.1312 -1.4251 C 0 0 0 0 0 0 0 0 0 0 0 0 8.5136 -2.3724 1.0333 N 0 0 0 0 0 0 0 0 0 0 0 0 8.1050 -3.6012 0.4789 O 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 2 3 1 0 3 4 1 0 4 5 1 0 5 6 1 0 6 7 1 0 7 8 1 0 8 9 1 0 9 10 1 0 10 11 2 0 10 12 1 0 12 13 2 0 13 14 1 0 14 15 2 0 15 16 1 0 16 17 1 0 17 18 2 0 18 19 1 0 19 20 2 0 20 21 1 0 21 22 2 0 16 23 1 0 23 24 2 0 24 25 1 0 25 26 2 0 26 27 1 0 27 28 2 0 28 29 1 0 15 30 1 0 30 31 2 0 2 32 1 0 32 33 1 0 31 12 1 0 22 17 1 0 28 23 1 0 M END $$$$
	ZINC89630354	0.84		ZINC89630354 RDKit 3D 32 34 0 0 0 0 0 0 0 0999 V2000 8.8789 -0.0496 0.2186 O 0 0 0 0 0 0 0 0 0 0 0 0 7.9093 -0.6528 0.6659 C 0 0 0 0 0 0 0 0 0 0 0 0 6.5237 -0.0748 0.7411 C 0 0 0 0 0 0 0 0 0 0 0 0 6.4614 1.2886 0.0969 C 0 0 0 0 0 0 0 0 0 0 0 0 5.2209 2.0079 0.5614 C 0 0 0 0 0 0 0 0 0 0 0 0 4.9566 3.1907 -0.3362 C 0 0 0 0 0 0 0 0 0 0 0 0 3.5635 3.7116 -0.0839 C 0 0 0 0 0 0 0 0 0 0 0 0 2.7417 3.5861 -1.3460 C 0 0 0 0 0 0 0 0 0 0 0 0 1.5051 2.8917 -1.0915 N 0 0 0 0 0 0 0 0 0 0 0 0 1.4806 1.5302 -0.8905 C 0 0 0 0 0 0 0 0 0 0 0 0 2.4664 0.8022 -0.9147 O 0 0 0 0 0 0 0 0 0 0 0 0 0.1564 0.9696 -0.6344 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.9877 1.7123 -0.5864 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.2096 1.1947 -0.3470 N 0 0 0 0 0 0 0 0 0 0 0 0 -2.3110 -0.1364 -0.1416 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.6050 -0.7167 0.1170 N 0 0 0 0 0 0 0 0 0 0 0 0 -3.6990 -1.9714 0.8225 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.7493 -2.8676 0.5759 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.8464 -4.0818 1.2535 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.8866 -4.4258 2.1986 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.8341 -3.5569 2.4636 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.7458 -2.3449 1.7807 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.7966 -0.0394 -0.3324 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.0079 -0.1591 0.3645 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.1633 0.4928 -0.0633 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.1289 1.2839 -1.2060 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.9421 1.4210 -1.9170 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.7920 0.7649 -1.4811 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.2208 -0.9324 -0.1735 N 0 0 0 0 0 0 0 0 0 0 0 0 -0.0201 -0.3664 -0.4182 C 0 0 0 0 0 0 0 0 0 0 0 0 7.9050 -1.9326 1.1818 N 0 0 0 0 0 0 0 0 0 0 0 0 9.1766 -2.5397 1.1506 O 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 2 3 1 0 3 4 1 0 4 5 1 0 5 6 1 0 6 7 1 0 7 8 1 0 8 9 1 0 9 10 1 0 10 11 2 0 10 12 1 0 12 13 2 0 13 14 1 0 14 15 2 0 15 16 1 0 16 17 1 0 17 18 2 0 18 19 1 0 19 20 2 0 20 21 1 0 21 22 2 0 16 23 1 0 23 24 2 0 24 25 1 0 25 26 2 0 26 27 1 0 27 28 2 0 15 29 1 0 29 30 2 0 2 31 1 0 31 32 1 0 30 12 1 0 22 17 1 0 28 23 1 0 M END $$$$

Assays:

Name	Assay stage	Target	Activity
Single dose inhibition of SARS-CoV-2 cytopathic effect in VeroE6	primary assay	Organism Severe acute respiratory syndrome-related coronavirus	inactive
Single dose inhibition of SARS-CoV-2 3CL-Pro	primary assay	Replicase polyprotein 1ab	inactive

Sections:

EOS100532

Basic Properties:

Additional Data:

Other Descriptors

External Databases

Structure formats:

Smiles

InChI

SDF

Similar ECBD compounds (1 entries):

Similar ZINC compounds (2 entries):

Assays: